The primary indicator of a usable Unix Compatibility Subsystem is the presence of a valid location for %UNIXROOT%. In general, this should be the root of a local volume (results may be unpredictable when this is directed to a network share or removable media which may not always be available). To test for this, open an OS/2 window and type:
set UNIXROOT <Enter>
This should return the value (if set) of the %UNIXROOT% variable. On that volume, look for the directories as discussed on this wiki page. This is a good indication that there is a working subsystem in place.
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